In this article, we propose a new method called ScisTree, which infers cell lineage tree and calls genotypes from noisy single cell genotype data.
Feb 1, 2020 · In this article, we propose a new method called ScisTree, which infers cell lineage tree and calls genotypes from noisy single cell genotype data.
Aug 28, 2019 · The maximum likelihood perfect phylogeny problem is intract- able in general (see Section 2.2). To develop a practical method, we adopt a ...
Accurate and efficient cell lineage tree inference from noisy single cell data: the maximum likelihood perfect phylogeny approach. Overview of attention for ...
Jan 26, 2022 · We introduce CellPhy, a maximum likelihood framework for inferring phylogenetic trees from somatic single-cell single-nucleotide variants.
Fast maximum-likelihood phylogeny inference from noisy single-cell data using the 'ScisTree' algorithm (Wu, Bioinformatics 2019).
Aug 21, 2019 · Perfect phylogeny is central to the ScisTree approach. To be complete, we provide a short de- scription for the perfect phylogeny problem.
Aug 28, 2019 · Accurate and efficient cell lineage tree inference from noisy single cell data: the maximum likelihood perfect phylogeny approach.
Aug 28, 2024 · An algorithm designed to optimally reconstruct the evolutionary history of B cell clonal lineages undergoing both SHM and CSR from scRNA-seq data.
Missing: perfect | Show results with:perfect
Aug 11, 2022 · Here, we describe Scelestial, a method for lineage tree reconstruction from single-cell datasets, based on the Berman approximation algorithm ...